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1

Chromatin three-dimensional interactions mediate genetic effects on gene expression

Delaneau, O., Zazhytska, M., Borel, C., Giannuzzi, G., Rey, G., Howald, C., Kumar, S., Ongen, H., Popadin, K., Marbach, D., Ambrosini, G., Bielser, D., Hacker, D., Romano, L., Ribaux, P., Wiederkehr,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.32 MB

english, 2019

2

Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals

Popadin, K., Polishchuk, L. V., Mamirova, L., Knorre, D., Gunbin, K.

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 549 KB

english, 2007

3

Mitochondrial DNA, direct repeats, deletions, and centenarians: An unfinished puzzle

Xinhong Guo, Igor Dombrovsky, Tanya Leibman, Yevgenya Kraytsberg, Konstantin Popadin, Konstantin Khrapko

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2010

Language:

english

File:

PDF, 120 KB

english, 2010

4

Repeats, longevity and the sources of mtDNA deletions: evidence from ‘deletional spectra’

Xinhong Guo, Konstantin Yu. Popadin, Natalya Markuzon, Yuriy L. Orlov, Yevgenya Kraytsberg, Kim J. Krishnan, Gábor Zsurka, Douglas M. Turnbull, Wolfram S. Kunz, Konstantin Khrapko

Journal:

Trends in Genetics

Year:

2010

Language:

english

File:

PDF, 787 KB

english, 2010

5

A manually curated database of tetrapod mitochondrially encoded tRNA sequences and secondary structures

Konstantin Yu Popadin, Leila A Mamirova, Fyodor A Kondrashov

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.14 MB

english, 2007

6

Purifying selection in mitochondria, free-living and obligate intracellular proteobacteria

Leila Mamirova, Konstantin Popadin, Mikhail S Gelfand

Journal:

BMC Evolutionary Biology

Year:

2007

Language:

english

File:

PDF, 1.25 MB

english, 2007

7

Purifying Selection in Mammalian Mitochondrial Protein-Coding Genes Is Highly Effective and Congruent with Evolution of Nuclear Genes

Popadin, K. Y., Nikolaev, S. I., Junier, T., Baranova, M., Antonarakis, S. E.

Journal:

Molecular Biology and Evolution

Year:

2013

Language:

english

File:

PDF, 324 KB

english, 2013

8

Genetic and Epigenetic Regulation of Human lincRNA Gene Expression

Popadin, Konstantin, Gutierrez-Arcelus, Maria, Dermitzakis, Emmanouil T., Antonarakis, Stylianos E.

Journal:

The American Journal of Human Genetics

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

9

Mitochondrial DNA Mutations and Cancer

Popadin, Konstantin, Gunbin, Konstantin V., Khrapko, Konstantin

Journal:

The American Journal of Pathology

Year:

2014

Language:

english

File:

PDF, 262 KB

english, 2014

10

When man got his mtDNA deletions?

Popadin, Konstantin, Safdar, Adeel, Kraytsberg, Yevgenya, Khrapko, Konstantin

Journal:

Year:

2014

Language:

english

File:

PDF, 380 KB

english, 2014

11

Gene Age Predicts the Strength of Purifying Selection Acting on Gene Expression Variation in Humans

Popadin, Konstantin Y., Gutierrez-Arcelus, Maria, Lappalainen, Tuuli, Buil, Alfonso, Steinberg, Julia, Nikolaev, Sergey I., Lukowski, Samuel W., Bazykin, Georgii A., Seplyarskiy, Vladimir B., Ioannidi

Journal:

The American Journal of Human Genetics

Year:

2014

Language:

english

File:

PDF, 1.35 MB

english, 2014

12

Biased Allelic Expression in Human Primary Fibroblast Single Cells

Borel, Christelle, Ferreira, Pedro G., Santoni, Federico, Delaneau, Olivier, Fort, Alexandre, Popadin, Konstantin Y., Garieri, Marco, Falconnet, Emilie, Ribaux, Pascale, Guipponi, Michel, Padioleau, I

Journal:

The American Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 5.30 MB

english, 2015

13

A genetic component of extinction risk in mammals

Polishchuk, Leonard V., Popadin, Konstantin Y., Baranova, Maria A., Kondrashov, Aleksey S.

Journal:

Year:

2015

Language:

english

File:

PDF, 471 KB

english, 2015

14

The complex SNP and CNV genetic architecture of the increased risk of congenital heart defects in Down syndrome

Sailani, M. R., Makrythanasis, P., Valsesia, A., Santoni, F. A., Deutsch, S., Popadin, K., Borel, C., Migliavacca, E., Sharp, A. J., Duriaux Sail, G., Falconnet, E., Rabionet, K., Serra-Juhe, C., Vica

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 812 KB

english, 2013

15

Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements

Nikolaev, S. I., Montoya-Burgos, J. I., Popadin, K., Parand, L., Margulies, E. H., Antonarakis, S. E.

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 498 KB

english, 2007

16

Distance-Ed Courses Work

Journal:

American Libraries

Year:

2009

Language:

english

File:

PDF, 228 KB

english, 2009

17

APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication

Seplyarskiy, Vladimir B., Soldatov, Ruslan A., Popadin, Konstantin Y., Antonarakis, Stylianos E., Bazykin, Georgii A., Nikolaev, Sergey I.

Journal:

Genome Research

Year:

2016

Language:

english

File:

PDF, 786 KB

english, 2016

18

Amelioration of premature aging in mtDNA mutator mouse by exercise: the interplay of oxidative stress, PGC-1α, p53, and DNA damage. A hypothesis

Safdar, Adeel, Annis, Sofia, Kraytsberg, Yevgenya, Laverack, Chloe, Saleem, Ayesha, Popadin, Konstantin, Woods, Dori C, Tilly, Jonathan L, Khrapko, Konstantin

Journal:

Current Opinion in Genetics & Development

Year:

2016

Language:

english

File:

PDF, 465 KB

english, 2016

19

Integration of mtDNA pseudogenes into the nuclear genome coincides with speciation of the human genus. A hypothesis

Gunbin, Konstantin, Peshkin, Leonid, Popadin, Konstantin, Annis, Sofia, Ackermann, Rebecca R., Khrapko, Konstantin

Journal:

Year:

2016

Language:

english

File:

PDF, 492 KB

english, 2016

20

Data on the time of integration of the human mitochondrial pseudogenes (NUMTs) into the nuclear genome

Gunbin, Konstantin, Peshkin, Leonid, Popadin, Konstantin, Annis, Sofia, Ackermann, Rebecca R., Khrapko, Konstantin

Journal:

Year:

2017

Language:

english

File:

PDF, 356 KB

english, 2017

21

The Immune Signaling Adaptor LAT Contributes to the Neuroanatomical Phenotype of 16p11.2 BP2-BP3 CNVs

Loviglio, Maria Nicla, Arbogast, Thomas, Jønch, Aia Elise, Collins, Stephan C., Popadin, Konstantin, Bonnet, Camille S., Giannuzzi, Giuliana, Maillard, Anne M., Jacquemont, Sébastien, Yalcin, Binnaz,

Journal:

The American Journal of Human Genetics

Year:

2017

Language:

english

File:

PDF, 2.10 MB

english, 2017

22

Slightly deleterious genomic variants and transcriptome perturbations in Down syndrome embryonic selection

Popadin, Konstantin, Peischl, Stephan, Garieri, Marco, Sailani, M. Reza, Letourneau, Audrey, Santoni, Federico, Lukowski, Samuel W., Bazykin, Georgii A., Nikolaev, Sergey, Meyer, Diogo, Excoffier, Lau

Journal:

Genome Research

Year:

2017

Language:

english

File:

PDF, 1.57 MB

english, 2017

23

Additional evidence of the link between mtDNA copy number and the body mass index

Skuratovskaia, D. A., Sofronova, J. K., Zatolokin, P. A., Popadin, K. Y., Vasilenko, M. A., Litvinova, L. S., Mazunin, I. O.

Journal:

Mitochondrial DNA Part A

Year:

2018

Language:

english

File:

PDF, 1.19 MB

english, 2018

24

Roles of Mitochondrial Dynamics under Stressful and Normal Conditions in Yeast Cells

Knorre, Dmitry A., Popadin, Konstantin Y., Sokolov, Svyatoslav S., Severin, Fedor F.

Journal:

Oxidative Medicine & Cellular Longevity

Year:

2013

Language:

english

File:

PDF, 1.32 MB

english, 2013

25

Chromatin three-dimensional interactions mediate genetic effects on gene expression

Delaneau, O., Zazhytska, M., Borel, C., Giannuzzi, G., Rey, G., Howald, C., Kumar, S., Ongen, H., Popadin, K., Marbach, D., Ambrosini, G., Bielser, D., Hacker, D., Romano, L., Ribaux, P., Wiederkehr,

Journal:

Year:

2019

File:

PDF, 2.32 MB

2019

26

ImtRDB: a database and software for mitochondrial imperfect interspersed repeats annotation

Shamanskiy, Viktor N., Timonina, Valeria N., Popadin, Konstantin Yu., Gunbin, Konstantin V.

Journal:

Year:

2019

Language:

english

File:

PDF, 4.24 MB

english, 2019

27

ImtRDB: a database and software for mitochondrial imperfect interspersed repeats annotation

Shamanskiy, Viktor N., Timonina, Valeria N., Popadin, Konstantin Yu., Gunbin, Konstantin V.

Journal:

Year:

2019

File:

PDF, 4.24 MB

2019

28

Correction to: ImtRDB: a database and software for mitochondrial imperfect interspersed repeats annotation

Shamanskiy, Viktor A., Timonina, Valeria N., Popadin, Konstantin Yu., Gunbin, Konstantin V.

Journal:

Year:

2019

Language:

english

File:

PDF, 238 KB

english, 2019

29

Correction to: ImtRDB: a database and software for mitochondrial imperfect interspersed repeats annotation

Shamanskiy, Viktor A., Timonina, Valeria N., Popadin, Konstantin Yu., Gunbin, Konstantin V.

Journal:

Year:

2019

File:

PDF, 238 KB

2019

30

Nucleotide repeats in mitochondrial genome determine human lifespan

Popadin, Konstantin, Bazykin, Georgii

Journal:

Nature Precedings

Year:

2008

Language:

english

File:

PDF, 104 KB

english, 2008

31

Body size of Holopedium gibberum under the influence of fish predation in small subarctic lakes

Popadin, Konstantin

Journal:

SIL Proceedings, 1922-2010

Year:

2002

Language:

english

File:

PDF, 600 KB

english, 2002

32

Nucleotide repeats in mitochondrial genome determine human lifespan

Popadin, Konstantin, Bazykin, Georgii

Journal:

Nature Precedings

Year:

2008

File:

PDF, 104 KB

2008

33

Molecular design of hypothalamus development

Romanov, Roman A., Tretiakov, Evgenii O., Kastriti, Maria Eleni, Zupancic, Maja, HÃ¤ring, Martin, Korchynska, Solomiia, Popadin, Konstantin, Benevento, Marco, Rebernik, Patrick, Lallemend, Francois, N

Journal:

Year:

2020

File:

PDF, 22.54 MB

2020

34

Express Method for Estimating Particle Isometricity for Quality Control Ferrosilicium

Timofeev, A S, Dvoichenkova, G P, Chernysheva, E N, Popadin, E G

Journal:

IOP Conference Series: Earth and Environmental Science

Year:

2020

File:

PDF, 845 KB

2020